Hotels in Mission Bay, San Diego

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Booking Insights
Recommended by KAYAK

Best hotels in Mission Bay (San Diego)

These are the best prices for 13-20 Jun.
The Wayfarer San Diego - San Diego - Pool
The Wayfarer San Diego
3.0 km from Mission Bay, San Diego, United States
8.9Very Good(1902)
Free Wi-Fi
Pool
S$ 625+
Check availability
The Dana on Mission Bay - San Diego - Bedroom
The Dana on Mission Bay
1.7 km from Mission Bay, San Diego, United States
8.3Very Good(1864)
Pool
Pet-friendly
S$ 425+
Check availability
Catamaran Resort Hotel and Spa - San Diego - Bedroom
Catamaran Resort Hotel and Spa
2.9 km from Mission Bay, San Diego, United States
8.3Very Good(686)
Free Wi-Fi
Pool
Pet-friendly
Spa
S$ 539+
Check availability
Paradise Point Resort & Spa - San Diego
Paradise Point Resort & Spa
1.2 km from Mission Bay, San Diego, United States
8.1Very Good(1998)
Free Wi-Fi
Pool
Pet-friendly
Spa
S$ 649+
Check availability
Hyatt Regency Mission Bay Spa And Marina - San Diego - Balcony
Hyatt Regency Mission Bay Spa And Marina
1.9 km from Mission Bay, San Diego, United States
7.7Good(2762)
Free Wi-Fi
Pool
Pet-friendly
Spa
S$ 527+
Check availability
Bahia Resort Hotel - San Diego - Restaurant
Bahia Resort Hotel
2.0 km from Mission Bay, San Diego, United States
8.1Very Good(1661)
Parking
Free Wi-Fi
Pool
Pet-friendly
S$ 542+
Check availability
San Diego Mission Bay Resort - San Diego - Restaurant
San Diego Mission Bay Resort
1.5 km from Mission Bay, San Diego, United States
7.8Good(468)
Free Wi-Fi
Pool
Pet-friendly
Spa
S$ 516+
Check availability
The Boardwalk Hotel - San Diego - Living room
The Boardwalk Hotel
2.4 km from Mission Bay, San Diego, United States
8.8Very Good(61)
Free Wi-Fi
S$ 555+
Check availability
Ith Mission Beach Backpacker Hostel - San Diego - Bedroom
Ith Mission Beach Backpacker Hostel
2.4 km from Mission Bay, San Diego, United States
9.1Wonderful(257)
Free Wi-Fi
S$ 272+
Check availability
Bay View Buyout A by AvantStay | Mission Beach Home on the Sand | Sleeps 20 - San Diego - Living room
Bay View Buyout A by AvantStay | Mission Beach Home on the Sand | Sleeps 20
2.4 km from Mission Bay, San Diego, United States
9.0Wonderful(17)
House
Free Wi-Fi
S$ 3,156+
Check availability
Mission Beach Townhome Getaway - San Diego - Bedroom
Mission Beach Townhome Getaway
2.5 km from Mission Bay, San Diego, United States
9.6Wonderful(34)
House
Parking
Free Wi-Fi
S$ 1,217+
Check availability
Paradise on Mission Bay - San Diego - Living room
Paradise on Mission Bay
2.7 km from Mission Bay, San Diego, United States
9.8Wonderful(31)
Condo
Free Wi-Fi
S$ 757+
Check availability
Mission Beach Bungalow: Steps to Ocean, Parking! - San Diego - Living room
Mission Beach Bungalow: Steps to Ocean, Parking!
2.3 km from Mission Bay, San Diego, United States
9.7Wonderful(22)
Apartment
Parking
Free Wi-Fi
S$ 763+
Check availability
Ocean Front Beach Mission Penthouse! - San Diego - Balcony
Ocean Front Beach Mission Penthouse!
2.6 km from Mission Bay, San Diego, United States
9.8Wonderful(19)
Condo
S$ 961+
Check availability
2 Bedroom Townhome 2 Mins. to the Beach - San Diego - Bedroom
2 Bedroom Townhome 2 Mins. to the Beach
2.4 km from Mission Bay, San Diego, United States
9.6Wonderful(1)
Free Wi-Fi
S$ 762+
Check availability
San Diego's Tuscan Villa Mansion On The Beach - San Diego - Patio
San Diego's Tuscan Villa Mansion On The Beach
2.6 km from Mission Bay, San Diego, United States
9.1Wonderful(83)
House
Free Wi-Fi
S$ 1,965+
Check availability
Manhattan Shores 1A - San Diego - Patio
Manhattan Shores 1A
2.4 km from Mission Bay, San Diego, United States
10Wonderful(1)
Apartment
Parking
Free Wi-Fi
Pet-friendly
S$ 610+
Check availability
Heart of MB, steps to the beach, garage and bikes - San Diego - Beach
Heart of MB, steps to the beach, garage and bikes
2.5 km from Mission Bay, San Diego, United States
8.5Very Good(39)
Condo
S$ 606+
Check availability
Luna Azul, Cozy Condo Only Steps to Miss - San Diego - Living room
Luna Azul, Cozy Condo Only Steps to Miss
2.4 km from Mission Bay, San Diego, United States
9.8Wonderful(79)
Condo
Parking
Free Wi-Fi
S$ 400+
Check availability
Bay View II by AvantStay Ocean View Mission Beach Home on the Sand - San Diego
Bay View II by AvantStay Ocean View Mission Beach Home on the Sand
2.4 km from Mission Bay, San Diego, United States
9.1Wonderful(29)
Apartment
Parking
Free Wi-Fi
S$ 761+
Check availability
Booking Insights

KAYAK’s insights for hotels in Mission Bay

Discover seasonal trends, ideal booking windows, and other data-driven tips to plan your stay in Mission Bay with confidence.

Which month has the cheapest hotel rates in Mission Bay?

Hotels are cheapest in Mission Bay in February, with average rates of S$ 369/night. In comparison, July is the most expensive month, with prices at S$ 601/night.

What is the cheapest day of the week to book a hotel in Mission Bay?

Monday offers the lowest rates in Mission Bay, with an average nightly price of S$ 336/night. The highest prices are found on Friday, with average rates at S$ 542/night.

How much is a hotel in Mission Bay for tonight?

The best deal for a 3-star hotel room in Mission Bay found by KAYAK users in the last 3 days was S$ 339, while a 4-star hotel the lowest price was S$ 382. The cheapest room found overall was for S$ 339.

How much is a hotel in Mission Bay for this weekend?

The cheapest hotel room in Mission Bay for the upcoming weekend found on KAYAK in the last 3 days was for S$ 484 per night. For the same dates, 3-star hotel rooms have been found for as low as S$ 513 per night and 4-star hotel rooms from S$ 484 per night.

Find deals

How much is a Mission Bay hotel?

Here are our most popular & best value hotels

Top tips for finding a hotel deal in Mission Bay

  • Not sure just how much there is to see and do in Mission Bay? KAYAK users usually book their hotel here for 4 days.

FAQs when booking a hotel in Mission Bay

  • What are the best hotels in Mission Bay?

    Mission Bay is a great part of San Diego to make your base. If you’re staying in Mission Bay area then Paradise Point Resort & Spa, Bahia Resort Hotel, and Catamaran Resort Hotel and Spa are all recommended on KAYAK.

  • Which hotels in Mission Bay are romantic?

    If you’re looking for a romantic break with your partner in Mission Bay, then why not stay at The Wayfarer San Diego, Paradise Point Resort & Spa, or Bahia Resort Hotel, which have been recommended by KAYAK users as great for couples.

Where to stay in Mission Bay?

Our map will help you find the perfect hotel in Mission Bay, San Diego by showing you the exact location of each hotel.

Everything you need to know for your stay in San Diego